BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007A01SP1|AL425613
(768 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1575 1473 0.0
>3x_Contig1575
Length = 11952
Score = 1473 bits (741), Expect = 0.0
Identities = 759/766 (99%), Gaps = 1/766 (0%)
Strand = Plus / Minus
Query: 3 gcaccagaaccaacgtggaaggaaacaccgattaaatttaaaccaagctctttgactgtc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2756 gcaccagaaccaacgtggaaggaaacaccgattaaatttaaaccaagctctttgactgtc 2697
Query: 63 ycaaggagaaccgggacgtcgtcaagttcacatccatactttgtggataatctacattga 122
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2696 tcaaggagaaccgggacgtcgtcaagttcacatccatactttgtggataatctacattga 2637
Query: 123 gcactggaatcgtcagtcacaattcttaacagcaattcggattctggatgayactttttg 182
||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2636 gcactggaatcgtcagtaacaattcttaacagcaattcggattctggatgatactttttg 2577
Query: 183 atcttatacaattcgtcaatattgtcaaacgtagattttttaacaccattcttggcagca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2576 atcttatacaattcgtcaatattgtcaaacgtagattttttaacaccattcttggcagca 2517
Query: 243 aatctgatgaaagaagaagccttacatgggtttgcgtagataattctttcaggatcgaca 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2516 aatctgatgaaagaagaagccttacatgggtttgcgtagataattctttcaggatcgaca 2457
Query: 303 ccacatgcyaacaccttctctatctcggatttggaagcacaatcgaaattggtagacatt 362
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2456 ccacatgctaacaccttctctatctcggatttggaagcacaatcgaaattggtagacatt 2397
Query: 363 gaagccaatctctttattatttcgatgtttggattacacttgacagcataaaatggagtc 422
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2396 gaagccaatctctttattatttcgatgtttggattacacttgacagcataaaatggagtt 2337
Query: 423 actcgaggaagaatttgagtccagtagtttctcaatctgcttatctcccctaaatcacaa 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2336 actcgaggaagaatttgagtccagtagtttctcaatctgcttatctcccctaaatcacaa 2277
Query: 483 acgaagaatgaattttcatctccggcatcgcaagtctcatgatttatagaatcaatcttc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2276 acgaagaatgaattttcatctccggcatcgcaagtctcatgatttatagaatcaatcttc 2217
Query: 543 tctttcaaagcagcnaagattttatgatggctctgttggtgtggtaactggccttgttta 602
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2216 tctttcaaagcagcaaagattttatgatggctctgttggtgtggtaactggccttgttta 2157
Query: 603 cttaatggcaatcccacagttgggttatatgagacgccctgtgtgacatcattagatatt 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2156 cttaatggcaatcccacagttgggttatatgagacgccctgtgtgacatcattagatatt 2097
Query: 663 ggccgctctatgtgtcctacggagttcatgactgtctgtattgatgaggtgcttaggctg 722
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2096 ggccgctctatgtgt-ctacggagttcatgactgtctgtattgatgaggtgcttaggctg 2038
Query: 723 tactttctcagatattaaagcaaaacgaaagcaagtgatgagatat 768
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2037 tactttctcagatattaaagcaaaacgaaagcaagtgatgagatat 1992
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5389
Number of Sequences: 1807
Number of extensions: 5389
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 768
length of database: 10,358,551
effective HSP length: 16
effective length of query: 752
effective length of database: 10,329,639
effective search space: 7767888528
effective search space used: 7767888528
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)